patRoon-deprecated: Deprecated and renamed functions.
In rickhelmus/patRoon: Workflows for Mass-Spectrometry Based Non-Target Analysis

patRoon-deprecated

R Documentation

Deprecated and renamed functions.

Description

Please do not use these functions anymore since they may be removed in the future.

Usage

reportMD(...)

exportDAFiles(
  anaInfo,
  format = "mzML",
  exportLine = TRUE,
  outPath = anaInfo$path,
  overWrite = FALSE
)

plotEIC(obj, ...)

groups(object, ...)

plotSpec(obj, ...)

formulaTable(...)

compoundTable(...)

Arguments

`...`	Passed to successor function.
`format`	The output format of exported files. Should be either `"mzXML"`, `"mzML"` or `"mzData"`.
`exportLine`	Export line spectra (`TRUE`) or profile spectra (`FALSE`). Usually line spectra are preferred, since profile spectra use signficantly more disk space and increase required memory during processing.
`outPath`	Character vector of output paths for exported analyses. Will be recycled if necessary.
`overWrite`	If `TRUE` existing files will be overwritten.