cc_graph: cc_graph
In rmflight/categoryCompare2: Meta-Analysis of High-Throughput Experiments Using Feature Annotations
cc_graph R Documentation
cc_graph
Description
A cc_graph class is a graphNEL with the added slot of
significant, a matrix of rows (nodes / annotations) and whether
they were found to be significant in a given enrichment (columns). This
matrix is used for classifying the annotations into different groups, and
generating either pie-charts or coloring the nodes in a visualization.
constructs a cc_graph given a graphNEL and a significant matrix.
Usage
cc_graph(graph, significant)
## S4 method for signature 'cc_graph'
show(object)
cc_graph(graph, significant)
Arguments
graph
the graphNEL
significant
a matrix indicating which nodes are significant in which experiment
object
the cc_graph to show
Slots
significantnumeric matrix of ones and zeros
rmflight/categoryCompare2 documentation built on Dec. 18, 2024, 9:13 a.m.
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| cc_graph | R Documentation |
cc_graph
Description
A cc_graph class is a graphNEL with the added slot of
significant, a matrix of rows (nodes / annotations) and whether
they were found to be significant in a given enrichment (columns). This
matrix is used for classifying the annotations into different groups, and
generating either pie-charts or coloring the nodes in a visualization.
constructs a cc_graph given a graphNEL and a significant matrix.
Usage
cc_graph(graph, significant)
## S4 method for signature 'cc_graph'
show(object)
cc_graph(graph, significant)
Arguments
graph |
the |
significant |
a matrix indicating which nodes are significant in which experiment |
object |
the cc_graph to show |
Slots
significantnumeric matrix of ones and zeros
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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