getDemographics: Get demographic data

In rmsharp/nprcmanager: Genetic Tools for Colony Management

Get demographic data

Description

This is a thin wrapper around labkey.selectRows().

Usage

getDemographics(colSelect = NULL)

Arguments

colSelect

(optional) a vector of comma separated strings specifying which columns of a dataset or view to import

Value

A data.frame containing LabKey demographic data with the columns specified in the single parameter provided.

Examples

 ## Needs a connection to a LabKey server
library(nprcgenekeepr)
siteInfo <- getSiteInfo()
colSet <- siteInfo$lkPedColumns
source <- " generated by getDemographics: "
pedSourceDf <- tryCatch(getDemographics(colSelect = colSet),
                        warning = function(wCond) {
                          cat(paste0("Warning", source, wCond),
                                     name = "nprcgenekeepr")
                          return(NULL)},
                        error = function(eCond) {
                          cat(paste0("Error", source, eCond),
                                     name = "nprcgenekeepr")
                          return(NULL)}
)

rmsharp/nprcmanager documentation built on Feb. 2, 2025, 12:45 a.m.