obfuscatePed: obfuscatePed takes a pedigree object and creates aliases for...

In rmsharp/nprcmanager: Genetic Tools for Colony Management

obfuscatePed takes a pedigree object and creates aliases for all IDs and adjusts all date within a specified amount.

Description

User provides a pedigree object (ped), the number of characters to be used for alias IDs (size), and the maximum number of days that the birthdate can be shifted (maxDelta).

Usage

obfuscatePed(
  ped,
  size = 6,
  maxDelta = 30,
  existingIds = character(0),
  map = FALSE
)

Arguments

ped	pedigree object
size	integer value indicating number of characters in alias IDs
maxDelta	integer value indicating maximum number of days that the birthdate can be shifted
existingIds	character vector of existing aliases to avoid duplication.
map	logical if TRUE a list object is returned with the new pedigree and a named character vector with the names being the original IDs and the values being the new alias values. Defaults to FALSE.

Value

An obfuscated pedigree

Examples

library(nprcgenekeepr)
ped <- qcStudbook(nprcgenekeepr::pedGood)
obfuscatedPed <- obfuscatePed(ped)
ped
obfuscatedPed

rmsharp/nprcmanager documentation built on Feb. 2, 2025, 12:45 a.m.