API for rnabioco/scbp
Boilerplate functions for single cell rna-seq analysis
| Global functions | |
|---|---|
| .onLoad | Source code |
| ExportToCellbrowserFast | Man page |
| add_clonotypes | Man page |
| add_features | Man page |
| build_cellbrowser | Man page |
| calc_da | Man page Source code |
| calc_diversity | Man page |
| check_in_metadata | Man page |
| closest_to_point | Man page Source code |
| downsample_cells | Man page |
| get_cell_count_matrix | Man page |
| get_clonotypes | Man page |
| get_counts | Man page |
| get_distinct_cols | Source code |
| get_example_data | Man page |
| get_metadata | Man page Source code |
| jaccard_index | Man page |
| jaccard_lists | Man page |
| make_cellbrowser | Man page |
| marker_type | Source code |
| plot_bc | Man page Source code |
| plot_cell_proportions | Man page Source code |
| plot_feature | Man page Source code |
| plot_features_split | Man page Source code |
| plot_harmony | Man page Source code |
| plot_heatmap | Man page Source code |
| plot_pca | Man page Source code |
| plot_tsne | Man page Source code |
| plot_umap | Man page Source code |
| plot_violin | Source code |
| plot_violins | Man page Source code |
| preprocess_alevin | Man page |
| preprocess_bus | Man page |
| presto_marker_description | Source code |
| sanitize_names | Man page |
| scbp | Man page |
| scbp-package | Man page |
| scran_fm_marker_description | Source code |
| scran_sm_marker_description | Source code |
| set_shared_orthologs | Man page |
| set_xlsx_class | Source code |
| seurat_marker_description | Source code |
| write_avg_expr | Man page Source code |
| write_markers_xlsx | Man page Source code |
