calcTM: Melting Temperature (Tm) of an oligo probe
In robertdouglasmorrison/DuffyTools: Duffy Lab Utility Tools
calcTM R Documentation
Melting Temperature (Tm) of an oligo probe
Description
Calculate the Tm of a set of DNA nucleotides
Usage
calcTM(probes)
Arguments
probes
character vector of DNA nucleotide sequences
Details
Calculates the melting temperature of the given oligos.
Any 'N's in the sequence cause a value of NA for that oligo.
Value
A numeric vector of the same length as probes
Note
Implemented as a Perl script, so requires write and execute permissions
on the current directory. Creates a file 'MeltingTemp.pl'.
References
by Joseba Bikandi, http://biophp.org
robertdouglasmorrison/DuffyTools documentation built on April 16, 2024, 6:31 a.m.
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| calcTM | R Documentation |
Melting Temperature (Tm) of an oligo probe
Description
Calculate the Tm of a set of DNA nucleotides
Usage
calcTM(probes)
Arguments
probes |
character vector of DNA nucleotide sequences |
Details
Calculates the melting temperature of the given oligos. Any 'N's in the sequence cause a value of NA for that oligo.
Value
A numeric vector of the same length as probes
Note
Implemented as a Perl script, so requires write and execute permissions on the current directory. Creates a file 'MeltingTemp.pl'.
References
by Joseba Bikandi, http://biophp.org
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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