FIL.applyFilterToStudy: DEPRECATED!!!!: Apply a filter to mmButo object

In robertogattabs/RadAgent: Package for handling DICOM RT files

Description

It applies filter to an mButo object to simplify RADIOMICS issues

Usage

FIL.applyFilterToStudy(obj.mmButo, ROINameForNormalization = NA,
  valueForNormalization = NA, ROIName, filter.pipeline,
  collection = "default", cropResult = TRUE, scaleFactor = "voxel")

Arguments

obj.mmButo	is the new.mmButo object
ROINameForNormalization	the name of the ROI used to normalize the signal
valueForNormalization	the highest value used to normalize the 'ROINameForNormalization' voxel values
ROIName	the name of the ROI to extract
filter.pipeline	is a list where is indicated the pipeline of filtering to be applied (in sequence)
collection	is the collection: the default is 'default'
cropResult	is a boolean (TRUE or FALSE) which indicates if the result should be cropped or not, in order to save memory. Default is TRUE
scaleFactor	can be 'voxel' or 'space'. If 'voxel' (the default) it consider the sam sigma values (if specified) for all the geoLet object, if 'space' it normalize the sigma according to the different pixelSpacing.

Value

a list containing the filtered images (cropped or not)

Examples

## Not run: 
# DEPRECATED!!!!!

## End(Not run) 

robertogattabs/RadAgent documentation built on June 30, 2018, 12:02 a.m.