imputationMap: Get map used for IBD genotype imputation

In rohan-shah/mpMap2: Genetic Analysis of Multi-Parent Recombinant Inbred Lines

Description

Get map used for IBD genotype imputation

Usage

imputationMap(object, ...)

## S4 method for signature 'imputed'
imputationMap(object, ...)

## S4 method for signature 'geneticData'
imputationMap(object, ...)

## S4 method for signature 'mpcrossMapped'
imputationMap(object, ...)

Arguments

object	The object from which to extract the IBD genotype imputation positions.
...	Extra parameters. Currently only "experiment" is supported, letting the user extract the imputation map for a specific experiment.

Details

Get the map of positions used for IBD genotype imputation. This is necessary because the points at which IBD genotype imputation has been performed may include non-marker points. See imputeFounders for further details.

Value

The map of positions used for IBD genotype imputation.

rohan-shah/mpMap2 documentation built on July 21, 2020, 8:58 p.m.