are_mrca_taxon_names_in_fasta: Determine if the MRCA priors' taxa names are present in the...
In ropensci/beautier: 'BEAUti' from R
View source: R/are_mrca_taxon_names_in_fasta.R
are_mrca_taxon_names_in_fasta R Documentation
Determine if the MRCA priors' taxa names are present in the FASTA files
Description
Determine if the MRCA priors' taxa names are present in the FASTA files
Usage
are_mrca_taxon_names_in_fasta(mrca_prior, fasta_filename)
Arguments
mrca_prior
a Most Recent Common Ancestor prior,
as returned by create_mrca_prior
fasta_filename
a FASTA filename.
Use get_fasta_filename to obtain a testing FASTA filename.
Note that BEAST2 also supports missing data,
by using a dash (-) or question mark (?)
as a sequence.
Value
TRUE if the MRCA priors' taxa names are
present in the FASTA files. FALSE otherwise.
Author(s)
Richèl J.C. Bilderbeek
ropensci/beautier documentation built on July 9, 2024, 6:14 a.m.
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View source: R/are_mrca_taxon_names_in_fasta.R
| are_mrca_taxon_names_in_fasta | R Documentation |
Determine if the MRCA priors' taxa names are present in the FASTA files
Description
Determine if the MRCA priors' taxa names are present in the FASTA files
Usage
are_mrca_taxon_names_in_fasta(mrca_prior, fasta_filename)
Arguments
mrca_prior |
a Most Recent Common Ancestor prior,
as returned by |
fasta_filename |
a FASTA filename.
Use |
Value
TRUE if the MRCA priors' taxa names are present in the FASTA files. FALSE otherwise.
Author(s)
Richèl J.C. Bilderbeek
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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