mk_txid_in_sq_mtrx: Return matrix of txid in sequence
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
mk_txid_in_sq_mtrx R Documentation
Return matrix of txid in sequence
Description
Searches through lineages of sequences' source organisms to
determine whether each txid is represented by the sequence.
Usage
mk_txid_in_sq_mtrx(phylota, txids, sids = phylota@sids)
Arguments
phylota
Phylota
txids
Taxonomic IDs
sids
Sequence IDs
Value
matrix
See Also
Other tools-private:
summary_phylota(),
update_phylota()
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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| mk_txid_in_sq_mtrx | R Documentation |
Return matrix of txid in sequence
Description
Searches through lineages of sequences' source organisms to determine whether each txid is represented by the sequence.
Usage
mk_txid_in_sq_mtrx(phylota, txids, sids = phylota@sids)
Arguments
phylota |
Phylota |
txids |
Taxonomic IDs |
sids |
Sequence IDs |
Value
matrix
See Also
Other tools-private:
summary_phylota(),
update_phylota()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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