scMsigdbScoring: scMsigdbScoring

Description Usage Arguments Value Author(s)

View source: R/scMSigdbScoring.R

Description

MSigdb signature scoring for single-cell clusters

Usage

1
scMsigdbScoring(object = NULL, category = NULL, geneSets = NULL)

Arguments

object

Seurat object

category

String of specific MSigDB category to use, default category='H' stands for 'hallmark gene sets'

geneSets

Vector of gene sets, default geneSets='NULL' stands for all gene sets in category will be used

Value

Seurat object

Author(s)

Wei Zhang


rstatistics/SCKIT documentation built on Dec. 22, 2021, 7:18 p.m.