scOne: single-cell analysis of one sample

Description Usage Arguments Value Author(s)

View source: R/scOne.R

Description

A wrapper of the standard workflow of Seurat

Usage

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scOne(
  object = NULL,
  nFeatures = 2000,
  nPC = 30,
  resolution = 0.5,
  perplexity = NULL
)

Arguments

object

Seurat object

nFeatures

Number of variable features to use

nPC

Number of principal components to use

resolution

Value of the resolution parameter

perplexity

Value of the perplexity parameter, set between 5 and 50

Value

Seurat object

Author(s)

Wei Zhang


rstatistics/SCKIT documentation built on Dec. 22, 2021, 7:18 p.m.