PERMANOVA1: Permutational Multivariate Analysis of Variance Using...
In rusher321/microbiotaPair: An R Package for Simplified Microbiome Analysis Workflows on Intervention Study
PERMANOVA1 R Documentation
Permutational Multivariate Analysis of Variance Using Distance Matrices
Description
The PERMANOVA1 aimed to assess the association between the overall profile and phenotype
Usage
PERMANOVA1(physeq, sampleid)
Arguments
physeq
(Required). A phyloseq object containing merged information of abundance,
sample data including the measured variables and categorical information of the samples.
sampleid
(Required) A character of the sampleid to connect phenotype and profiles.
Details
09/01/2020 ShenZhen China
Value
permanova result
Author(s)
Hua Zou
Examples
data(physeq_data)
sampleid <- "SampleID"
PERMANOVA1(physeq_data, sampleid)
rusher321/microbiotaPair documentation built on July 24, 2024, 8:40 p.m.
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| PERMANOVA1 | R Documentation |
Permutational Multivariate Analysis of Variance Using Distance Matrices
Description
The PERMANOVA1 aimed to assess the association between the overall profile and phenotype
Usage
PERMANOVA1(physeq, sampleid)
Arguments
physeq |
(Required). A |
sampleid |
(Required) A character of the sampleid to connect phenotype and profiles. |
Details
09/01/2020 ShenZhen China
Value
permanova result
Author(s)
Hua Zou
Examples
data(physeq_data)
sampleid <- "SampleID"
PERMANOVA1(physeq_data, sampleid)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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