PcorPair: pairwise partial correlations for Pair Study

In rusher321/microbiotaPair: An R Package for Simplified Microbiome Analysis Workflows on Intervention Study

pairwise partial correlations for Pair Study

Description

To estimate the relationship bwtween features/taxa and phenotypes given others.

Usage

PcorPair(microbiota, metadata, metadataVar, confounder,method = "s")

Arguments

microbiota	(Required). data.frame, microbiota ,row is sample
metadata	(Required). data.frame. phenotype, row is sample
metadataVar	(Required). a set of characters
confounder	(Required). A set of Characters string that are covariates. information.
method	(Required). A chareacter string indicating which partial correlation coefficient is to be computed. "peason","kendall" or "spearman" can be abbreviated.

Details

15/01/2020 ShenZhen China

Value

Returns a list with the results of pcc.

Author(s)

Huahui Ren

rusher321/microbiotaPair documentation built on July 24, 2024, 8:40 p.m.