CoxpresDbPartners-class: Template for 'CoxpresDbPartners' class

Description Arguments

Description

This class stores the gene-partners of a set of genes, and some summary statistics over those partners that are obtained from analysis of a user-provided gene_statistics object.

Arguments

gene_statistics

A data-frame. Must be non-empty and have columns 'gene_id', 'p_value' and 'direction'.

partners

A data-frame with a 'source_id' and a 'target_id' column.

partner_summaries

A data-frame.

cluster_graph

A igraph object (or NULL if not defined).


russHyde/coxpresdbr documentation built on Dec. 24, 2019, 11:59 a.m.