API for russHyde/miiq
Microarrays Are Awesome: Get Them Analysed HERE!
| Global functions | |
|---|---|
| .build_acc_validator | Source code |
| .check_marray_dl_config | Source code |
| .check_or_get_eset | Source code |
| .get_from_env | Man page Source code |
| .make_gpl_filename | Man page Source code |
| .make_gpl_url | Man page Source code |
| .parse_gds_to_gpl | Source code |
| .validity_eld | Source code |
| DiffexConfig | Man page Source code |
| DiffexConfig-class | Man page |
| MicroarrayDownloadConfig | Man page Source code |
| MicroarrayDownloadConfig-class | Man page |
| MicroarrayImportConfig | Man page Source code |
| MicroarrayImportConfig-class | Man page |
| MicroarrayPreprocessConfig | Man page Source code |
| MicroarrayPreprocessConfig-class | Man page |
| [ | Man page |
| [,eset_limma_dataset,character,missing,missing-method | Man page |
| [,eset_limma_dataset,numeric,missing,missing-method | Man page |
| add_entrez_columns_if_gset_has_annotgpl | Source code |
| add_entrez_ids_to_esets | Man page Source code |
| add_gpl_to_eset | Man page Source code |
| build_eset_normaliser | Man page Source code |
| check_if_pretransformed_eset | Man page Source code |
| contrast_builder | Man page Source code |
| design_builder | Man page Source code |
| dl_aryx_raw | Man page Source code |
| dl_gds_to_gpl | Man page Source code |
| dl_geo_processed | Man page Source code |
| dl_geo_raw | Man page Source code |
| download_gpl_annotations | Man page Source code |
| eset_limma_dataset | Man page Source code |
| eset_limma_dataset-class | Man page |
| filter_and_transform_eset | Man page Source code |
| geo_id_to_accession | Man page Source code |
| get_or_else | Man page Source code |
| get_refseq_colnames | Man page Source code |
| get_refseq_column | Man page Source code |
| gld_fnBuilder_exptDesign | Man page Source code |
| gld_fnBuilder_keepSample | Man page Source code |
| gld_fnDefault_esetAnnotation | Man page Source code |
| gld_fnDefault_exptDesign | Man page |
| gld_fnDefault_keepProbe | Man page Source code |
| gld_fnDefault_keepSample | Man page |
| gld_fnDefault_transformAndProbeFilter | Man page Source code |
| has_refseq_column | Man page Source code |
| import_aryx_affy_raw | Man page Source code |
| import_geo_affy_raw | Man page Source code |
| import_geo_processed | Man page Source code |
| import_gpl | Man page Source code |
| inf_omit | Man page Source code |
| is_valid_orgdb | Source code |
| keep_all_entrez_probes | Man page Source code |
| keep_all_probes | Man page Source code |
| keep_all_samples | Man page Source code |
| keep_probe_fn | Man page Source code |
| limma_workflow | Man page Source code |
| meta-diffex_classes-NULL-function | Man page |
| meta-extdata_download_classes-NULL-function | Man page |
| meta-extdata_import_classes-NULL-function | Man page |
| multisymbol_to_entrez_ids | Man page Source code |
| na_inf_omit | Man page Source code |
| normalise_processed_eset | Man page Source code |
| normalise_raw_affy_eset | Man page Source code |
| nullFunction | Man page |
| paste_gene_symbols | Man page Source code |
| preprocess_eset_workflow | Man page Source code |
| run_diffex_workflow | Man page |
| run_diffex_workflow,ExpressionSet,DiffexConfig-method | Man page |
| run_download_workflow | Man page Source code |
| run_import_workflow | Man page |
| run_import_workflow,MicroarrayImportConfig-method | Man page |
| run_preprocess_workflow | Man page |
| run_preprocess_workflow,ExpressionSet,MicroarrayPreprocessConfig | Man page |
| swissprot_column_to_refseq | Man page Source code |
| symbol_to_entrez_id | Man page Source code |
