API for russHyde/reeq
Provides Some Helper Functions For RNA-Seq Analysis / IO
| Global functions | |
|---|---|
| append_feature_annotations | Man page Source code |
| as_sig_test_summary | Man page Source code |
| cbind_feature_counts | Man page Source code |
| check_validity_k_covered | Man page Source code |
| compute_fitted_values | Man page Source code |
| cqn_dgelist | Man page Source code |
| define_contrasts | Man page Source code |
| export | Man page Source code |
| export.default | Source code |
| export.sig_test_summary | Man page Source code |
| extract_cutadapt_summary | Man page Source code |
| feature_counts_to_dgelist | Man page Source code |
| filter_by_read_count | Man page Source code |
| get_features | Man page Source code |
| get_features.default | Source code |
| get_features.sig_test_summary | Man page Source code |
| get_gc_percent | Man page Source code |
| get_lrt | Source code |
| get_sig_features | Source code |
| get_sig_test_summary | Man page Source code |
| import_contrasts | Man page Source code |
| import_cutadapt_summary | Man page Source code |
| import_design | Man page Source code |
| import_hisat2_summary | Man page Source code |
| is_nonempty_df | Source code |
| is_nonempty_list | Source code |
| is_single_string | Source code |
| is_valid_fcounts_df | Source code |
| parse_colon_separated_lines | Man page Source code |
| parse_cutadapt_summary | Man page Source code |
| parse_hisat2_summary | Man page Source code |
| parse_lrt_table | Man page Source code |
| parse_numeric_fields | Man page Source code |
| read_feature_counts | Man page Source code |
| read_single_feature_counts_file | Man page Source code |
| replace_with | Man page Source code |
| runner_k_covered | Man page Source code |
| set_offset | Man page Source code |
| spread_and_rename_cutadapt_fieldnames | Man page Source code |
| spread_and_rename_hisat2_fieldnames | Man page Source code |
| spread_and_rename_numeric_fields | Man page Source code |
| which_k_covered | Man page Source code |
| which_k_covered_across_samples | Man page Source code |
| which_k_covered_each_sample | Man page Source code |
