generate_lr_geneset: Generate a geneset resource for each LR
In saezlab/liana: LIANA: a LIgand-receptor ANalysis frAmework
generate_lr_geneset R Documentation
Generate a geneset resource for each LR
Description
Generate a geneset resource for each LR
Usage
generate_lr_geneset(sce, resource, lr_sep = "^")
Arguments
sce
SingleCellExperiment object with liana_tensor_c2c computed
resource
resource with 'source', 'target', 'weight' columns
Value
a tibble in decoupleR format
saezlab/liana documentation built on Aug. 10, 2024, 8:14 a.m.
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| generate_lr_geneset | R Documentation |
Generate a geneset resource for each LR
Description
Generate a geneset resource for each LR
Usage
generate_lr_geneset(sce, resource, lr_sep = "^")
Arguments
sce |
SingleCellExperiment object with liana_tensor_c2c computed |
resource |
resource with 'source', 'target', 'weight' columns |
Value
a tibble in decoupleR format
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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