sortConnections: Sort Connections of a completed dataframe

In samissimas/ciceroAddition: Additional functions to do analysis on Cicero data

Description

Takes a completed dataframe with KO and WT conns and sorts them based on a given bed file containing peaks

Usage

sortConnections(loop.data, bed)

Arguments

loop.data	the generated dataframe whose connections you want to sort
bed	the peaks you want to search for and keep within the conns

Value

the loop.data dataframe with newly sorted peaks

Examples

loop.data = sortConnections(loop.data, bed)

samissimas/ciceroAddition documentation built on Aug. 10, 2019, 12:02 a.m.