Global functions | |
---|---|
burst_copies | Man page |
choose_pairing | Man page |
compare_all | Man page |
convert_init_dist_to_df | Man page |
copy_number_evolution | Man page |
copy_number_growth | Man page |
cumulate_distribution | Man page |
cumulate_matrix | Man page |
dist_to_data_frame | Man page |
find_paramater_balance_copy_number_variation | Man page |
full_pipeline_comparison | Man page |
get_distance_to_initial_timestep | Man page |
get_k80_matrix | Man page |
get_random_sequence | Man page |
get_summary_stats | Man page |
get_summary_stats_timestep | Man page |
kill_copies | Man page |
normalise_distribution | Man page |
pairwise_distances | Man page |
pairwise_distances_bursts | Man page |
pairwise_distances_timestamp | Man page |
pick_random_event | Man page |
plot_pairwise_data | Man page |
plot_pairwise_data_complex | Man page |
plot_sequence_counts | Man page |
plot_summary_stats | Man page |
plot_summary_stats_complex | Man page |
point_mutation_nucleotide | Man page |
point_mutation_sequence | Man page |
point_mutation_sequences | Man page |
rcombinator | Man page |
rcombinator-package | Man page |
recombine_sequences | Man page |
retrotransposon_evolution | Man page |
simulate_burst_evolution | Man page |
simulate_bursts | Man page |
simulate_point_mutation_markov | Man page |
simulate_point_mutation_markov_cheap | Man page |
simulate_point_mutation_markov_expensive | Man page |
simulate_recombination | Man page |
simulate_recombination_cheap | Man page |
simulate_recombination_expensive | Man page |
simulate_recombination_families | Man page |
simulate_recombination_summary | Man page |
simulate_without_recombination | Man page |
simulate_without_recombination_cheap | Man page |
simulate_without_recombination_expensive | Man page |
simulate_without_recombination_families | Man page |
simulate_without_recombination_summary | Man page |
stringdist_ape | Man page |
stringdist_biostrings | Man page |
stringdist_levenshtein | Man page |
test_event | Man page |
update_burst_mean | Man page |
valid_ranges | Man page |
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