copy_number_evolution: Simulates the copy number evolution for a set of transposons...
In sams25/rcombinator_old: Tools to Simulate the Evolution of Genetic Sequences
Description
Usage
Arguments
Value
Description
Simulates the copy number evolution for a set of transposons (very basic function)
Usage
1
2
copy_number_evolution(timestep, final_time, init_num_sequences, burst_function,
burst_function_args, kill_function, kill_function_args)
Arguments
timestep
The size of the timesteps of jumps
final_time
The time to simulate until
init_num_sequences
The initial number of sequences we have
burst_function
To convert from copy numbers before burst to copy numbers after burst
kill_function
To saturate a copy number at some given value
Value
A data frame with time and copy number for all timesteps
sams25/rcombinator_old documentation built on May 28, 2019, 8:40 a.m.
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Description Usage Arguments Value
Description
Simulates the copy number evolution for a set of transposons (very basic function)
Usage
1 2 | copy_number_evolution(timestep, final_time, init_num_sequences, burst_function,
burst_function_args, kill_function, kill_function_args)
|
Arguments
timestep |
The size of the timesteps of jumps |
final_time |
The time to simulate until |
init_num_sequences |
The initial number of sequences we have |
burst_function |
To convert from copy numbers before burst to copy numbers after burst |
kill_function |
To saturate a copy number at some given value |
Value
A data frame with time and copy number for all timesteps
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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