Extract_Modality: Extract multi-modal data into list by modality

In samuel-marsh/scCustomize: Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing

Extract multi-modal data into list by modality

Description

Reorganize multi-modal data after import with Read10X() or scCustomize read functions. Organizes sub-lists by data modality instead of by sample.

Usage

Extract_Modality(matrix_list)

Arguments

matrix_list

list of matrices to split by modality

Value

list of lists, with one sublist per data modality. Sub-list contain 1 matrix entry per sample

Examples

## Not run: 
multi_mat <- Read10X(...)
new_multi_mat <- Extract_Modality(matrix_list = multi_mat)

## End(Not run)

samuel-marsh/scCustomize documentation built on Dec. 20, 2024, 7:41 a.m.