getDataFrameOfDuplicateCompounds: This fucntion creates a data frame which contains the...
In sandraTL/PADIGM: Pathway Analysis with distance between genes and metablites
Description
Usage
Arguments
Examples
View source: R/compoundListFunctions.R
Description
This fucntion creates a data frame which contains the duplicated compounds
in the initial graph. We need this because some reaction has a subtrate or
a product that has a metabolite that we find more than one in the graph but
we don't know which node we should use (reaction type ortholog). We prefer
not to use those reactions
#### ortholog
Usage
1
getDataFrameOfDuplicateCompounds(compoundDataFrame)
Arguments
compounds
data frame
Examples
1
getDataFrameOfDuplicateCompounds(compoundDataFrame)
sandraTL/PADIGM documentation built on May 29, 2019, 1:45 p.m.
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Description Usage Arguments Examples
View source: R/compoundListFunctions.R
Description
This fucntion creates a data frame which contains the duplicated compounds in the initial graph. We need this because some reaction has a subtrate or a product that has a metabolite that we find more than one in the graph but we don't know which node we should use (reaction type ortholog). We prefer not to use those reactions #### ortholog
Usage
1 | getDataFrameOfDuplicateCompounds(compoundDataFrame)
|
Arguments
compounds |
data frame |
Examples
1 | getDataFrameOfDuplicateCompounds(compoundDataFrame)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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