Global functions | |
---|---|
Graph-class | Man page |
RUnitTest | Source code |
allShortestPaths,Graph-method | Man page |
assoDataXlsx | Source code |
associatedShortestPaths,Graph-method | Man page |
barplotFunctionGeneToAllMetabo | Source code |
barplot_adjustMaximalDistance | Man page Source code |
c2f | Source code |
changeDFassoToRigthDistances | Source code |
correctKeggIdString | Source code |
correctReactionString | Source code |
createGraphFromPathway | Man page Source code |
createIGraph,GraphElements-method | Man page |
distanceGeneToAllMetabolite | Man page Source code |
finalReactionEdgeDF | Man page Source code |
fromAssosDFEntryToIGraphIdDF,Graph-method | Man page |
genesInKEGGandInMap | Source code |
getAllGeneInMap | Source code |
getAllHumanGeneInKEGG | Source code |
getAllMetaboliteInKEGG | Source code |
getAllMetaboliteInMap | Source code |
getAssociatedMetaboByGene | Source code |
getAssociationForHeatmap | Source code |
getCellsToHighligh | Source code |
getCommonNames | Source code |
getCompoundNodeKgmlId | Man page Source code |
getDataFrameOfDuplicateCompounds | Man page Source code |
getDistanceAll | Man page Source code |
getDistanceAsso | Man page Source code |
getFinalAssoDfSd,Graph-method | Man page |
getFinalDFSHortestDistance,Graph-method | Man page |
getHeadTailKgmlIdOfEdge | Man page Source code |
getIdGeneInGraph,Graph-method | Man page |
getIdMetabolitesInGraph,Graph-method | Man page |
getKGMLRootNode | Source code |
getListEdgeFromGeneKGML | Man page Source code |
getListNodeFromKGML | Man page Source code |
getListReactionFromKGML | Man page Source code |
getPathwayKGML | Man page Source code |
heatmapFunction | Man page Source code |
hello | Man page |
histogramFunction | Source code |
igraph-class | Man page |
isFileInDirectory | Source code |
merge2DFWithSmallestValue | Source code |
mergeRowsWithSmallestValueByKEGGId | Man page Source code |
mergeVectorsLowerValues | Man page Source code |
metabolitesInKEGGandInMap | Source code |
multiplot | Source code |
numberOfMetabolites | Source code |
numberOfReactions | Source code |
permutationFunction | Man page Source code |
removeDuplicatedColumnDF | Source code |
removeNotInGraph | Source code |
removeRowsDistanceAll | Man page Source code |
removeRowsDistanceAsso | Source code |
test.c2f | Source code |
toCompoundAdressfile | Source code |
toStringAdressfile | Source code |
toStringDestfile | Source code |
toStringPathFile | Source code |
unlistEdgeReactionCol | Man page Source code |
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