Files in sankaranlab/SCAVENGE
Identifying genetic trait/phenotype relevant cell type/state at single cell resolution
.DS_Store
.Rbuildignore
.github/.gitignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/rworkflows.yml
.gitignore
DESCRIPTION
LICENSE
Meta/vignette.rds
NAMESPACE
NEWS.md
R/SCAVENGE_color.R
R/cal_scalefactor.R
R/capOutlierQuantile.R
R/data.R
R/do_lsi.R
R/example_data.R
R/get_sigcell_simple.R
R/getmutualknn.R
R/load_rdata.R
R/max_min_scale.R
R/randomWalk_sparse.R
R/seedindx.R
R/tfidf.R
README.Rmd
README.md
SCAVENGE.Rproj
data/example_results.rda
image/schematic-view_1.png
inst/.DS_Store
inst/CITATION
inst/extdata/mono.PP001.bed
inst/rda/pbmc5k_SE.rda
man/.DS_Store
man/cal_scalefactor.Rd
man/capOutlierQuantile.Rd
man/do_lsi.Rd
man/example_data.Rd
man/example_results.Rd
man/get_sigcell_simple.Rd
man/getmutualknn.Rd
man/load_rdata.Rd
man/max_min_scale.Rd
man/randomWalk_sparse.Rd
man/seedindex.Rd
man/tfidf.Rd
vignettes/.DS_Store
vignettes/.gitignore
vignettes/SCAVENGE.Rmd
vignettes/docker.Rmd
