ReadDeconth5Folder: Load decont count matrix from an h5 file in each sub-folder
In sanofi-pi/prifti: Generates QC plots, performs ambient RNA removal, and enhanced differential from single cell RNA sequencing data
Description
Usage
Arguments
Value
See Also
Description
Load decont count matrix from an h5 file in each sub-folder
Usage
1
ReadDeconth5Folder(filedir, fn = "count_matrix.h5")
Arguments
filedir
Directory where each folder contains filename fn
fn
File name of each .h5 file. By default, fn = "raw_gene_bc_matrices_h5.h5"
Value
Count matrix with genes and barcodes
See Also
Read10Xh5_v2, ReadCelseq
sanofi-pi/prifti documentation built on Oct. 12, 2020, 8:06 p.m.
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Description Usage Arguments Value See Also
Description
Load decont count matrix from an h5 file in each sub-folder
Usage
1 | ReadDeconth5Folder(filedir, fn = "count_matrix.h5")
|
Arguments
filedir |
Directory where each folder contains filename fn |
fn |
File name of each .h5 file. By default, fn = "raw_gene_bc_matrices_h5.h5" |
Value
Count matrix with genes and barcodes
See Also
Read10Xh5_v2, ReadCelseq
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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