MitoBoxPlot: Plot a boxplot for the fraction of mitochondrial rna

Description Usage Arguments Value See Also

View source: R/veni.R

Description

Plot a boxplot for the fraction of mitochondrial rna

Usage

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MitoBoxPlot(
  E,
  order.by = c("average depth", "mito percentage")[1],
  choose = "all"
)

Arguments

E

Count matrix (see ?Read_h5)

order.by

Order by a quantity associated with each sample. Options are "AvgDepth" or "Mito", default is AvgDepth.

choose

See ?GetMito or ?FilterMito

Value

ggplot objects of genes detected ordered by average depth

See Also

GeneBoxPlot; CoverageBoxPlot


sanofi-pi/prifti documentation built on Oct. 12, 2020, 8:06 p.m.