RandomTissueSummary: Generate a random overlap

In saralinker/brainImageR: A Framework for visualizing gene set enrichment throughout neurodevelopment

Description

random overlap for background correction and bootstrapping

Usage

RandomTissueSummary(i, genes, samplesize, refset = c("developing",
  "adult"))

Arguments

i	current iteration
genes	all genes to sample from
samplesize	sample size to select from gene list
refset	reference map. developing (default) or adult

Value

returns a list of the random gene overlap for each tissue

Examples

##Internal to brainImageR, called within SpatialEnrichment
#brainImageR:::loadworkspace()
##First load in a gene set
data(vth)
#tissueExp <- RandomTissueSummary(1, vth, 20)

saralinker/brainImageR documentation built on May 29, 2019, 1:51 p.m.