check_index_classification: Converts numeric values to column names in tax_table

View source: R/internal.R

check_index_classificationR Documentation

Converts numeric values to column names in tax_table

Description

Converts numeric values to column names in tax_table.

Usage

check_index_classification(phyloseq_obj, columns)

Arguments

phyloseq_obj

A phyloseq-class object. It must contain sample_data()) with information about each sample, and it must contain tax_table()) with information about each taxa/gene.

columns

Column name as a string or numeric in the tax_table for the factor to conglomerate by.

Value

string


schuyler-smith/phyloschuyler documentation built on Aug. 16, 2024, 5:36 a.m.