biocMaintained: Bioconductor Maintained Packages

In seandavi/BiocPkgTools: Collection of simple tools for learning about Bioconductor Packages

Bioconductor Maintained Packages

Description

List all the packages associated with a maintainer. By default, it will return all packages associated with the [e-mail] email. hasBiocMaint returns a logical vector corresponding to the input character vector of packages indicating whether any package is maintained by the Bioconductor core team.

Usage

biocMaintained(
  main = "maintainer@bioconductor\\.org",
  version = BiocManager::version(),
  pkgType = c("software", "data-experiment", "workflows", "data-annotation")
)

hasBiocMaint(
  pkg,
  version = BiocManager::version(),
  main = "maintainer@bioconductor\\.org",
  repo = c("BioCsoft", "BioCexp", "BioCworkflows", "BioCann")
)

Arguments

main	character(1) The regex for searching through the Maintainer column as obtained from biocPkgList().
version	character(1) the character version number as used to access the online build report. For example, "3.14". The default is the "current version" as given by BiocManager::version(). Note that this is a character vector of length one and not a number.
pkgType	character(1) The type of packages for which to get build status information for. Valid values are: software: Software packages data-experiment: Experiment data packages data-annotation: Annotation data packages workflows: Workflow packages
pkg	character(1) A vector of package names (case sensitive).
repo	character() A vector of Bioconductor repositories to search through. By default, it will search through all Bioconductor repositories.

Value

For biocMaintained: a tibble of packages associated with the maintainer.

For hasBiocMaint: a logical vector indicating whether the package is maintained by Bioconductor.

Examples

biocMaintained()

## maintained by Hervé and not maintainer at bioconductor dot org
hasBiocMaint("BiocGenerics")

seandavi/BiocPkgTools documentation built on Feb. 2, 2024, 12:02 p.m.