problemPage: generate hyperlinked HTML for build reports for Bioc packages

In seandavi/BiocPkgTools: Collection of simple tools for learning about Bioconductor Packages

generate hyperlinked HTML for build reports for Bioc packages

Description

This is a quick way to get an HTML report of packages maintained by a specific developer or which depend directly on a specified package. The function is keyed to filter based on either the maintainer name or by using the 'Depends', 'Suggests' and 'Imports' fields in package descriptions.

Usage

problemPage(
  authorPattern = "V.*Carey",
  dependsOn,
  ver = "devel",
  includeOK = FALSE
)

Arguments

authorPattern	character(1) regexp used with grep() to filter author field of package DESCRIPTION for listing
dependsOn	character(1) name of a Bioconductor package. The function will return the status of packages that directly depend on this package Can only be used when 'authorPattern' is the empty string.
ver	character(1) version tag for Bioconductor
includeOK	logical(1) include entries from the build report that are listed as "OK". Default FALSE will result in only those entries that are in WARNING or ERROR state.

Value

DT::datatable call; if assigned to a variable, must evaluate to get the page to appear

Author(s)

Vince Carey, Mike L. Smith

Examples

if (interactive()) {
  problemPage()
  problemPage(dependsOn = "limma")
}

seandavi/BiocPkgTools documentation built on April 28, 2024, 1:31 p.m.