inf_mat_prior: Infection history prior R

In seroanalytics/serosolver: Inference Framework for Serological Data

Infection history prior R

Description

R implementation of the infection history prior assuming common infection risk across individuals in a given year

Usage

inf_mat_prior(infection_history, age_mask, alpha1, beta1)

Arguments

infection_history	the infection history matrix
age_mask	the age mask, giving the first index of the infection_history matrix that each individual can be exposed to. One entry per individual
alpha1	alpha parameter for beta distribution
beta1	beta parameter for beta distribution

Value

a prior probability for each individual

See Also

Other priors: calc_phi_probs_indiv(), calc_phi_probs_spline(), calc_phi_probs(), create_prior_mu(), create_prob_shifts(), find_beta_prior_mode(), find_beta_prior_with_mean_var(), find_beta_prior_with_mean(), fit_beta_prior(), fit_normal_prior(), infection_history_prior(), prob_mus(), prob_shifts()

seroanalytics/serosolver documentation built on April 24, 2023, 9:52 a.m.