seqReference: seqReference
In serratus-bio/tantalus: R Data Exploration for Serratus
seqReference-class R Documentation
seqReference
Description
An S4-Object definition for the Pan-Genome / Query Reference
Details
Contains:
- Fasta index of genome (.fa.fai)
- Summarizer Meta-data file (.sumzer.tsv)
- Serratax taxonomy information (.serratax) [not implemented]
Slots
rnameString of reference version name
faiData.frame for a fasta index file
sumzerData.frame of the summarizer meta-data
taxData.frame of the serratax output taxonomy information
serratus-bio/tantalus documentation built on March 29, 2023, 9:39 p.m.
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| seqReference-class | R Documentation |
seqReference
Description
An S4-Object definition for the Pan-Genome / Query Reference
Details
Contains: - Fasta index of genome (.fa.fai) - Summarizer Meta-data file (.sumzer.tsv) - Serratax taxonomy information (.serratax) [not implemented]
Slots
rnameString of reference version name
faiData.frame for a fasta index file
sumzerData.frame of the summarizer meta-data
taxData.frame of the serratax output taxonomy information
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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