expandMs1Conditions | R Documentation |
Create a data.frame
of all possible combinations of the given arguments.
It ensures that just arguments are applied that yield a valid
MethodModification.xml file.
expandMs1Conditions(..., family = "Calcium", version = "3.2")
expandTms2Conditions(
ActivationType = c("CID", "HCD", "ETD", "UVPD"),
...,
MassList = NULL,
family = "Calcium",
version = "3.2"
)
... |
further named arguments, used to create the combination of conditions. |
family |
|
version |
|
ActivationType |
|
MassList |
|
data.frame
with all possible combinations of conditions/settings.
validMs1Settings()
validTms2Settings()
, expand.grid()
expandMs1Conditions(FirstMass=100, LastMass=400)
expandTms2Conditions(
ActivationType="CID",
OrbitrapResolution="R120K",
IsolationWindow=1,
MaxITTimeInMS=200,
Microscans=as.integer(40),
AgcTarget=c(1e5, 5e5, 1e6),
CIDCollisionEnergy=c(NA, seq(7, 35, 7)),
MassList=cbind(mz=c(560.6, 700.5, 933.7), z=rep(1, 3))
)
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