read_pi: Read the Preference Index (PI) achieved by a fly in a trial...
In shaliulab/idocr: Analyze traces created in the Individual Drosophila Optogenetics Conditioner (IDOC)
read_pi R Documentation
Read the Preference Index (PI) achieved by a fly in a trial or set of trials
Load the PI as computed by idocr (machine) and stored in a .csv file
The PI will be set to NA if only aversive or appetitive exits occur,
AND also if their sum is not at least min_exits
n_exits will be NA if only aversive or appetitive exits occur, otherwise it will be their sum
(even if under min_exits)
Description
Read the Preference Index (PI) achieved by a fly in a trial or set of trials
Load the PI as computed by idocr (machine) and stored in a .csv file
The PI will be set to NA if only aversive or appetitive exits occur,
AND also if their sum is not at least min_exits
n_exits will be NA if only aversive or appetitive exits occur, otherwise it will be their sum
(even if under min_exits)
Usage
read_pi(path, roi, min_exits = 3)
shaliulab/idocr documentation built on June 1, 2025, 4:59 p.m.
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| read_pi | R Documentation |
Read the Preference Index (PI) achieved by a fly in a trial or set of trials Load the PI as computed by idocr (machine) and stored in a .csv file The PI will be set to NA if only aversive or appetitive exits occur, AND also if their sum is not at least min_exits n_exits will be NA if only aversive or appetitive exits occur, otherwise it will be their sum (even if under min_exits)
Description
Read the Preference Index (PI) achieved by a fly in a trial or set of trials Load the PI as computed by idocr (machine) and stored in a .csv file The PI will be set to NA if only aversive or appetitive exits occur, AND also if their sum is not at least min_exits n_exits will be NA if only aversive or appetitive exits occur, otherwise it will be their sum (even if under min_exits)
Usage
read_pi(path, roi, min_exits = 3)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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