This package implements the method csSAM that computes cell-specific differential expression from measured cell proportions using SAM, as described in:
Cell type-specific gene expression differences in complex tissues Shen-Orr SS, Tibshirani R, Khatri P, Bodian DL, Staedtler F, Perry NM, Hastie T, Sarwal MM, Davis MM and Butte AJ Nature methods, 7(4), pp. 287–9. ISSN 1548-7105 10.1038/nmeth.1439
# install package devtools if necessary install.packages('devtools') # install csSAM devtools::install_github('shenorlab/csSAM')
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.