API for sigven/oncoEnrichR
Functional annotation and enrichment analysis of genesets in the context of cancer
| Global functions | |
|---|---|
| add_excel_sheet | Source code |
| annotate_protein_complex | Source code |
| annotate_subcellular_compartments | Source code |
| gene_tissue_cell_spec_cat | Source code |
| get_crispr_lof_scores | Source code |
| get_genes_unknown_function | Source code |
| get_go_enrichment | Source code |
| get_lower_tri | Source code |
| get_network_communities | Source code |
| get_network_hubs | Source code |
| get_ppi_network | Source code |
| get_string_network_nodes_edges | Source code |
| get_universal_enrichment | Source code |
| get_upper_tri | Source code |
| hpa_prognostic_genes | Source code |
| init_report | Source code |
| onco_enrich | Man page Source code |
| target_disease_associations | Source code |
| target_drug_associations | Source code |
| tcga_aberration_matrix | Source code |
| tcga_aberration_table | Source code |
| tcga_co_expression | Source code |
| tcga_oncoplot_genes | Source code |
| validate_db_df | Source code |
| verify_query_genes | Source code |
| write | Man page Source code |
