save_tags: Save Document Tags

In simon-hans/CEDARS: Simple and Efficient Pipeline for Electronic Health Record Annotation

Save Document Tags

Description

Save name of EHR document metadata tags. Individual notes or parts of notes can be labelled with up to 10 tags, typically the patient's name at the time, the type of note, the note section, the author, etc. Tags are not mandatory.

Usage

save_tags(uri_fun, user, password, host, replica_set, port, database, tag_vect)

Arguments

uri_fun	Uniform resource identifier (URI) string generating function for MongoDB credentials.
user	MongoDB user name.
password	MongoDB user password.
host	MongoDB host server.
replica_set	MongoDB replica set, if indicated.
port	MongoDB port.
database	MongoDB database name.
tag_vect	Character vector of 10 tag names.

Value

MongoDB operation results.

Examples

## Not run: 
save_tags(uri_fun = mongo_uri_standard, user = 'John', password = 'db_password_1234',
host = 'server1234', port = NA, database = 'TEST_PROJECT',
tag_vect = c('note_type', 'note_section', 'author', 'patient_name', NA, NA, NA, NA, NA, NA))

## End(Not run)

simon-hans/CEDARS documentation built on Feb. 14, 2024, 3:16 a.m.