select_patient: Select Next Patient to Review

In simon-hans/CEDARS: Simple and Efficient Pipeline for Electronic Health Record Annotation

Select Next Patient to Review

Description

Selects next available patient to review by CEDARS end user. If a patient record is already locked it will be used, otherwise next in line is chosen. If a specific patient ID was requested, record will be locked and selected.

Usage

select_patient(
  uri_fun,
  user,
  password,
  host,
  replica_set,
  port,
  database,
  end_user,
  patient_id = NA
)

Arguments

uri_fun	Uniform resource identifier (URI) string generating function for MongoDB credentials.
user	MongoDB user name.
password	MongoDB user password.
host	MongoDB host server.
replica_set	MongoDB replica set, if indicated.
port	MongoDB port.
database	MongoDB database name.
end_user	CEDARS end user name.
patient_id	Used if a specific patient record is requested, instead of a search for next record to annotate.

Value

Selected patient_id.

simon-hans/CEDARS documentation built on Feb. 14, 2024, 3:16 a.m.