Man pages for simonvandekar/pbj
Parametric Bootstrap Joint Testing Procedures for Neuroimaging
| addSignal | Loads NIfTI Images and Adds Synthetic Signal |
| cluster | Computes contiguous clusters from a statistical image given a... |
| coef.statMap | Gets a 4D niftiImage of the statistical image from a statMap... |
| colorBar | Draws a color bar in a figure |
| crop | Crop niftiImages |
| getDesign | Gets a Full and Reduced Design Matrices for a Linear Model |
| getPvalues | Gets p-values for Simulation Study |
| image.niftiImage | Create images of a NiFTI object |
| image.statMap | View statMap and pbj results in a statMap object |
| inferenceIndex | Gets numeric index of observed stat corresponding to the... |
| lmPBJ | Computes Statistical Map for Neuroimaging Data |
| maxima | Computes local maxima from an nifti image |
| mmeStat | Compute maxima, CMI, or CEI inference statistics |
| palm | this is an R wrapper function for PALM it has limited... |
| pbjBoot | Performs (semi)Parametric Bootstrap Joint ((s)PBJ) Inference |
| pbjInference | Performs (semi)Parametric Bootstrap Joint ((s)PBJ) Inference |
| pbjInferenceBG | Performs (semi)Parametric Bootstrap Joint ((s)PBJ) Inference |
| pbjInferenceFG | Performs (semi)Parametric Bootstrap Joint ((s)PBJ) Inference |
| plotData.statMap | Creates dataframes, emmeans, and models of the selected ROI... |
| ptfce.statmap | Compute pTFCE image |
| resave | Updates a .Rdata file |
| stat.statMap | Returns a statistical niftiImage object from a statMap object |
| summary.statMap | object A statMap object |
| table.statMap | Create cluster/maxima summary table |
| var.statMap | Gets a niftiImage of the variance image from a statMap object |
| vpapx_edgeworth | A vectorized version of papx_edgeworth |
| wecdf | Computes empirical weighted cdf. Modified from ecdf |
| write.statMap | Write the statMap objects out |
