Man pages for simonvandekar/pbj
Parametric Bootstrap Joint Testing Procedures for Neuroimaging

addSignalLoads NIfTI Images and Adds Synthetic Signal
clusterComputes contiguous clusters from a statistical image given a...
coef.statMapGets a 4D niftiImage of the statistical image from a statMap...
colorBarDraws a color bar in a figure
cropCrop niftiImages
getDesignGets a Full and Reduced Design Matrices for a Linear Model
getPvaluesGets p-values for Simulation Study
image.niftiImageCreate images of a NiFTI object
image.statMapView statMap and pbj results in a statMap object
inferenceIndexGets numeric index of observed stat corresponding to the...
lmPBJComputes Statistical Map for Neuroimaging Data
maximaComputes local maxima from an nifti image
mmeStatCompute maxima, CMI, or CEI inference statistics
palmthis is an R wrapper function for PALM it has limited...
pbjBootPerforms (semi)Parametric Bootstrap Joint ((s)PBJ) Inference
pbjInferencePerforms (semi)Parametric Bootstrap Joint ((s)PBJ) Inference
pbjInferenceBGPerforms (semi)Parametric Bootstrap Joint ((s)PBJ) Inference
pbjInferenceFGPerforms (semi)Parametric Bootstrap Joint ((s)PBJ) Inference
plotData.statMapCreates dataframes, emmeans, and models of the selected ROI...
ptfce.statmapCompute pTFCE image
resaveUpdates a .Rdata file
stat.statMapReturns a statistical niftiImage object from a statMap object
summary.statMapobject A statMap object
table.statMapCreate cluster/maxima summary table
var.statMapGets a niftiImage of the variance image from a statMap object
vpapx_edgeworthA vectorized version of papx_edgeworth
wecdfComputes empirical weighted cdf. Modified from ecdf
write.statMapWrite the statMap objects out
simonvandekar/pbj documentation built on Nov. 3, 2023, 9:33 a.m.