write.statMap: Write the statMap objects out

In simonvandekar/pbj: Parametric Bootstrap Joint Testing Procedures for Neuroimaging

Write the statMap objects out

Description

Given a statMap object and a directory write the objects as stat.nii.gz, coef.nii.gz and sqrtSigma.nii.gz

Usage

write.statMap(
  x,
  outdir,
  images = TRUE,
  sqrtSigma = TRUE,
  statMethod = c("p", "S", "chisq")
)

Arguments

x	the statMap object to write out
outdir	the directory to write into
images	Logical indicating whether or not to write out the nifti images.
sqrtSigma	Logical indicating whether or not to write out the objects needed for bootstrapping.
statMethod	Passed to stat.statMap to specify how to write the statistical image. p= -log10(p) * sign(coef), S=RESI, chisq=chi-squared statistic

Value

a list of what was written

simonvandekar/pbj documentation built on Nov. 3, 2023, 9:33 a.m.