mmeStat: Compute maxima, CMI, or CEI inference statistics

In simonvandekar/pbj: Parametric Bootstrap Joint Testing Procedures for Neuroimaging

Compute maxima, CMI, or CEI inference statistics

Description

Compute maxima, CMI, or CEI inference statistics

Usage

mmeStat(stat, rois = FALSE, mask, cft, maxima = FALSE, CMI = FALSE, CEI = TRUE)

Arguments

stat	statistical image
rois	passed to maxima and cluster functions. Returns image with ROI indices.
mask	Mask image.
cft	A single threshold on the scale of the statistical image (chi-squared) for CEI or CMI.
maxima	Compute local maxima?
CMI	Compute cluster masses?
CEI	Compute cluster extents?

Value

Returns a list with the maxima and CEI for the given image. This function is used as the default 'statistic' argument in [pbjInference()].

simonvandekar/pbj documentation built on Nov. 3, 2023, 9:33 a.m.