API for skgallagher/InfectionTrees
Sample, Analyze, and Plot Infection Trees
| Global functions | |
|---|---|
| %>% | Man page |
| binary_likelihood_profs | Man page Source code |
| binary_loglike_wrapper | Man page Source code |
| bootstrap_clusters | Man page Source code |
| bp_loglike_binary_cov | Man page Source code |
| calculate_transmission_prob | Man page Source code |
| compute_A_infects_B | Man page Source code |
| covariate_df_to_mat | Man page |
| draw_covariate_rows | Man page Source code |
| draw_features | Man page Source code |
| general_cluster_like | Man page |
| general_cluster_like.dt | Man page |
| general_generation_infection | Man page Source code |
| general_loglike | Man page Source code |
| general_loglike_mc_trees | Man page |
| general_tree_sampler | Man page Source code |
| likelihood_profs | Man page Source code |
| loglike_wrapper | Man page Source code |
| mc_trees_to_A_infects_B | Man page Source code |
| rcpp_hello_world | Source code |
| sample_connections | Man page Source code |
| sample_gen_out_cond | Man page Source code |
| sample_general_cond_trees | Man page Source code |
| sample_general_tree_perm | Man page Source code |
| sample_mc_binary_cov | Man page Source code |
| sample_mc_binary_cov_inner | Man page Source code |
| sample_mc_trees | Man page Source code |
| sample_single_gen_out_cond | Man page Source code |
| sample_trees_fixed_g | Man page Source code |
| sample_unif_trees_no_features | Man page Source code |
| sample_unique_perms | Man page Source code |
| simulate_bp | Man page Source code |
| simulate_general_outbreak_inner | Man page Source code |
| summarize_binary_clusters | Man page Source code |
| summarize_binary_cov_trees | Man page Source code |
| tb_clean | Man page |
