TRRUST: Transcription factor targets from TRRUST

In slowkow/tftargets: Human Transcription Factor Targets

Description

Transcription factor targets from TRRUST

Usage

TRRUST

Format

A list of gene vectors keyed by transcription factor names.

Source

http://www.grnpedia.org/trrust/

References

Han, H., Shim, H., Shin, D., Shim, J. E., Ko, Y., Shin, J., Kim, H., Cho, A., Kim, E., Lee, T., Kim, H., Kim, K., Yang, S., Bae, D., Yun, A., Kim, S., Kim, C. Y., Cho, H. J., Kang, B., Shin, S. & Lee, I. TRRUST: a reference database of human transcriptional regulatory interactions. Sci. Rep. 5, 11432 (2015). (PubMed)

Examples

length(TRRUST)
TRRUST[1]
TRRUST[["STAT3"]]
hist(sapply(TRRUST, length))

slowkow/tftargets documentation built on May 30, 2019, 3:06 a.m.