ModuleFeaturePlot: ModuleFeaturePlot

In smorabit/scWGCNA: hdWGCNA

ModuleFeaturePlot

Description

Plot module eigengenes as a FeaturePlot

Usage

ModuleFeaturePlot(
  seurat_obj,
  module_names = NULL,
  wgcna_name = NULL,
  reduction = "umap",
  features = "hMEs",
  order_points = TRUE,
  restrict_range = TRUE,
  point_size = 0.5,
  alpha = 1,
  label_legend = FALSE,
  ucell = FALSE,
  raster = FALSE,
  raster_dpi = 500,
  raster_scale = 1,
  plot_ratio = 1,
  title = TRUE
)

Arguments

seurat_obj	A Seurat object
features	What to plot? Can select hMEs, MEs, scores, or average
order	TRUE, FALSE, or "shuffle" are valid options

Examples

ModuleFeaturePlot

smorabit/scWGCNA documentation built on April 4, 2024, 10:32 a.m.