PlotLollipop: PlotLollipop

In smorabit/scWGCNA: hdWGCNA

PlotLollipop

Description

An Internal function for PlotDMEsLollipop to Plotting function for the results of FindDMEs and FindAllDMEs

Usage

PlotLollipop(modules, cur_DMEs, pvalue, avg_log2FC = "avg_log2FC")

Arguments

pvalue	p_value or fdr used for the comparison in the DMEs dataframe
seurat_obj	A Seurat object
DMEs	dataframe output from FindDMEs or FindAllDMEs
group.by	the column name of the selected comparison in the DMEs dataframe
comparison	character vector or a list of character vectors containing the comparison in the DMEs dataframe

Value

A ggplot object

Examples

plot_list <- PlotLollipop(modules, DMEs, cur_title= c("Group1_vs_Group2"), pvalue, avg_log2FC = 'avg_log2FC')

smorabit/scWGCNA documentation built on April 4, 2024, 10:32 a.m.