simSamp: Simulate a sample OTU vector
In smvargas/PERMANOVA: Power estimation for microbiome studies using pairwise distances and PERMANOVA.
Description
Usage
Arguments
Details
Value
See Also
Examples
Description
Generates a labelled uniform vector from specified number of OTUs.
Usage
1
simSamp(otu_number = 1000, sequence_depth = 1)
Arguments
otu_number
number of OTUs
sequence_depth
number of sequence counts per OTU bin
Details
For weighted analysis, specify a sequence depth greater than 1; for unweighted analyses, sequence depth is 1 (default).
Value
numeric vector labelled with OTU names
See Also
Examples
1
simSamp(100,10)
smvargas/PERMANOVA documentation built on May 20, 2019, 12:37 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value See Also Examples
Description
Generates a labelled uniform vector from specified number of OTUs.
Usage
1 | simSamp(otu_number = 1000, sequence_depth = 1)
|
Arguments
otu_number |
number of OTUs |
sequence_depth |
number of sequence counts per OTU bin |
Details
For weighted analysis, specify a sequence depth greater than 1; for unweighted analyses, sequence depth is 1 (default).
Value
numeric vector labelled with OTU names
See Also
Examples
1 | simSamp(100,10)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.