Files in snaketron/IgGeneUsage

Differential gene usage in immune repertoires

.github/workflows/r.yml

.gitignore

.travis.yml

DESCRIPTION

LICENSE

NAMESPACE

NEWS

R/dgu.R R/loo.R R/utils_dgu.R R/utils_gu.R R/utils_input.R R/utils_pmax.R R/utils_ppc.R R/utils_stats.R R/utils_usage.R README.md

_config.yml

configure

configure.win

data/CDR3_Epitopes.RData

data/IGHV_HCV.RData

data/Ig.RData

data/Ig_SE.RData

data/d_zibb_1.RData

data/d_zibb_2.RData

data/d_zibb_3.RData

data/d_zibb_4.RData

data/d_zibb_5.RData

data/d_zibb_6.RData

inst/CITATION

inst/extdata/iglogo.png

inst/extdata/iglogo.svg

inst/extdata/logo.png

inst/extdata/readme.png

inst/include/stan_meta_header.hpp

inst/scripts/d_zibb_1.R inst/scripts/d_zibb_2.R inst/scripts/d_zibb_3.R inst/scripts/d_zibb_4.R inst/scripts/d_zibb_5.R inst/scripts/d_zibb_6.R

inst/stan/dgu.stan

inst/stan/dgu_paired.stan

inst/stan/dgu_paired_rep.stan

inst/stan/dgu_rep.stan

inst/stan/gu.stan

inst/stan/gu_rep.stan

man/DGU.Rd man/IGHV_Epitopes.Rd man/IGHV_HCV.Rd man/Ig.Rd man/IgGeneUsage-package.Rd man/Ig_SE.Rd man/LOO.Rd man/d_zibb_1.Rd man/d_zibb_2.Rd man/d_zibb_3.Rd man/d_zibb_4.Rd man/d_zibb_5.Rd man/d_zibb_6.Rd

src/Makevars.win

tests/testthat.R tests/testthat/test-model.R vignettes/User_Manual.Rmd

snaketron/IgGeneUsage documentation built on April 23, 2024, 2:22 a.m.