Files in snaketron/genphen
genphen: tool for quantification of genotype-phenotype associations in genome wide association studies (GWAS)
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/genphen.R
R/procedures.R
R/util.R
README.md
data/dichotomous.phenotype.saap.RData
data/genotype.saap.RData
data/genotype.saap.msa.RData
data/genotype.snp.RData
data/genotype.snp.msa.RData
data/phenotype.saap.RData
data/phenotype.snp.RData
inst/CITATION
inst/NEWS.Rd
inst/extdata/CONFIG
inst/extdata/H.stan
inst/extdata/U.stan
inst/extdata/genotype.saap.fasta
inst/extdata/genotype.snp.fasta
man/dichotomous.phenotype.saap.Rd
man/genotype.saap.Rd
man/genotype.saap.msa.Rd
man/genotype.snp.Rd
man/genotype.snp.msa.Rd
man/phenotype.saap.Rd
man/phenotype.snp.Rd
man/runDiagnostics.Rd
man/runGenphen.Rd
man/runPhyloBiasCheck.Rd
tests/testthat.R
tests/testthat/test.bhattacharyya.R
tests/testthat/test.convert.msa.to.genotype.R
tests/testthat/test.hdi.R
tests/testthat/test.kappa.R
vignettes/genphenManual.Rnw
